BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB026B12LP1|AL428506
(857 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1397 1688 0.0
>3x_Contig1397
Length = 8011
Score = 1688 bits (851), Expect = 0.0
Identities = 855/857 (99%)
Strand = Plus / Minus
Query: 1 accattgaacacaatactttaatactacctgattatactctaggagtgatttacttctgg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7178 accattgaacacaatactttaatactacctgattatactctaggagtgatttacttctgg 7119
Query: 61 tatcattatgcataatatcgtcccagagactcgtcaatcatccattctggtggcagttag 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7118 tatcattatgcataatatcgtcccagagactcgtcaatcatccattctggtggcagttag 7059
Query: 121 agtacgcccttttaccgatgaggaaagcacgcgccttgtacatgaagagaacggtaacat 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7058 agtacgcccttttaccgatgaggaaagcacgcgccttgtacatgaagagaacggtaacat 6999
Query: 181 ggtgtatctgaaagacactgtactgaatataccattatccgcaccgagtctgggaataga 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6998 ggtgtatctgaaagacactgtactgaatataccattatccgcaccgagtctgggaataga 6939
Query: 241 tgacaaaagtactctgctcagaactcagtccaaattcaggcccattggaatacgaaagat 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6938 tgacaaaagtactctgctcagaactcagtccaaattcaggcccattggaatacgaaagat 6879
Query: 301 catcgattgcgtagatgataagatgttgatatttgatccaagtaaatccaatccattgaa 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6878 catcgattgcgtagatgataagatgttgatatttgatccaagtaaatccaatccattgaa 6819
Query: 361 tgaattgaatgagaaccttgtgcacagtagttccaatgagaatagaagaaggctcagacg 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6818 tgaattgaatgagaaccttgtgcacagtagttccaatgagaatagaagaaggctcagacg 6759
Query: 421 atttggagagcagaaatttatctttgatagaattttcgatatggatgtgacccaacaaga 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6758 atttggagagcagaaatttatctttgatagaattttcgatatggatgtgacccaacaaga 6699
Query: 481 agtttatgagaataccacaagaccgttgttagactctgtactcgatggattcaacggcac 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6698 agtttatgagaataccacaagaccgttgttagactctgtactcgatggattcaacggcac 6639
Query: 541 cgtatttgcatatggtgccacaggatgtggtaaaacgtttactatcagtggtacctcaga 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6638 cgtatttgcatatggtgccacaggatgtggtaaaacgtttactatcagtggtacctcaga 6579
Query: 601 gcaacctggaataattttcttaactatgcaggaattgttcataaggatggagcaattaaa 660
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6578 gcaacctggaataattttcttaactatgcaggaattgttcataaggatggagcaattaac 6519
Query: 661 agataccaagaagtttcaattgcaattatcatttttagagatttacaacgaacaaatcca 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6518 agataccaagaagtttcaattgcaattatcatttttagagatttacaacgaacaaatcca 6459
Query: 721 tgacctattggatcccaatatatcgtcaaagaaacttgtaataagggaagattcatacaa 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6458 tgacctattggatcccaatatatcgtcaaagaaacttgtaataagggaagattcatacaa 6399
Query: 781 tcgaaccttcgtctccaacttatcaaaacattcacvcgaaaatgtggaggaagtgatgga 840
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 6398 tcgaaccttcgtctccaacttatcaaaacattcacccgaaaatgtggaggaagtgatgga 6339
Query: 841 cctagtcatcaaaggaa 857
|||||||||||||||||
Sbjct: 6338 cctagtcatcaaaggaa 6322
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6408
Number of Sequences: 1807
Number of extensions: 6408
Number of successful extensions: 48
Number of sequences better than 1.0e-20: 1
length of query: 857
length of database: 10,358,551
effective HSP length: 16
effective length of query: 841
effective length of database: 10,329,639
effective search space: 8687226399
effective search space used: 8687226399
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.7 bits)